Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 AL391647.1-201ENST00000395664 511 ntBASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 PMS2P2-201ENST00000425039 1128 ntBASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 AC025279.2-201ENST00000569730 653 ntBASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 AC010319.3-201ENST00000597028 470 ntBASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 AC009474.1-201ENST00000455096 1565 ntBASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.5■□□□□ 0.23
GOLGA6L4A6NEF3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 MIR770-201ENST00000390219 98 ntBASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
GOLGA6L4A6NEF3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 MARK2P9-201ENST00000430958 1727 ntBASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms