Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC005229.1-201ENST00000392885 409 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AL136309.1-201ENST00000403917 691 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 BCRP2-202ENST00000447763 634 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 BCRP6-201ENST00000510112 632 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 BCRP7-201ENST00000511549 544 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC078819.1-201ENST00000547454 765 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC012085.1-201ENST00000548270 765 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 KRT18P8-201ENST00000581937 1246 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC008825.2-201ENST00000603374 718 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AL445209.1-201ENST00000607269 3491 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 BEND3P3-201ENST00000611030 2440 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC244669.2-201ENST00000612320 853 ntBASIC12.75□□□□□ -0.37
COPS3Q9UNS2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COPS3Q9UNS2 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 MEX3B-202ENST00000558133 4333 ntBASIC12.74□□□□□ -0.37
COPS3Q9UNS2 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COPS3Q9UNS2 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms