Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 AL805961.1-203ENST00000641078 1258 ntBASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 AC090114.2-201ENST00000608477 7054 ntBASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PARPBPQ9NWS1 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AC018629.1-201ENST00000623381 1736 ntBASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PARPBPQ9NWS1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CICP8-201ENST00000455800 2813 ntBASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PARPBPQ9NWS1 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms