Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 AL021155.1-201ENST00000438808 2637 ntBASIC15.9■□□□□ 0.14
CBX8Q9HC52 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 AC020917.4-201ENST00000623994 1999 ntBASIC15.9■□□□□ 0.14
CBX8Q9HC52 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 HMGA1P1-201ENST00000415560 1062 ntBASIC15.9■□□□□ 0.14
CBX8Q9HC52 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 FAM8A4P-201ENST00000435433 1213 ntBASIC15.9■□□□□ 0.14
CBX8Q9HC52 API5-211ENST00000534695 560 ntTSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 WASH4P-201ENST00000564273 1246 ntBASIC15.9■□□□□ 0.14
CBX8Q9HC52 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 AC021016.3-201ENST00000608367 477 ntBASIC15.9■□□□□ 0.14
CBX8Q9HC52 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 AL008718.2-201ENST00000609206 1313 ntBASIC15.9■□□□□ 0.14
CBX8Q9HC52 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CBX8Q9HC52 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CBX8Q9HC52 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 AC073413.1-201ENST00000603927 732 ntBASIC15.89■□□□□ 0.13
CBX8Q9HC52 LINC02084-201ENST00000606069 1096 ntBASIC15.89■□□□□ 0.13
CBX8Q9HC52 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 AC132938.4-201ENST00000623835 848 ntBASIC15.89■□□□□ 0.13
CBX8Q9HC52 AL033527.5-201ENST00000641382 801 ntBASIC15.89■□□□□ 0.13
CBX8Q9HC52 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CBX8Q9HC52 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.89■□□□□ 0.13
CBX8Q9HC52 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CBX8Q9HC52 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CBX8Q9HC52 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CBX8Q9HC52 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CBX8Q9HC52 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.88■□□□□ 0.13
CBX8Q9HC52 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.88■□□□□ 0.13
CBX8Q9HC52 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CBX8Q9HC52 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.88■□□□□ 0.13
CBX8Q9HC52 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CBX8Q9HC52 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms