Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 RNA5SP412-201ENST00000516234 123 ntBASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 AC090386.2-201ENST00000623010 1039 ntBASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPF3BQ9BZI7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 PGAM1P5-201ENST00000548011 764 ntBASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 AC133540.1-201ENST00000620845 1019 ntBASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPF3BQ9BZI7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 AC135782.3-201ENST00000562782 2105 ntBASIC17■□□□□ 0.31
UPF3BQ9BZI7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 TCAF1P1-201ENST00000414990 2232 ntBASIC17■□□□□ 0.31
UPF3BQ9BZI7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 FAM21FP-201ENST00000426241 1131 ntBASIC17■□□□□ 0.31
UPF3BQ9BZI7 YBX1P6-201ENST00000442962 1002 ntBASIC17■□□□□ 0.31
UPF3BQ9BZI7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms