Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 BANF1P3-201ENST00000412556 261 ntBASIC12.48□□□□□ -0.41
TMEM54Q969K7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 MIR6769A-201ENST00000617340 73 ntBASIC12.48□□□□□ -0.41
TMEM54Q969K7 AC079336.7-201ENST00000623428 1078 ntBASIC12.48□□□□□ -0.41
TMEM54Q969K7 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 FMO6P-201ENST00000236166 1620 ntBASIC12.48□□□□□ -0.41
TMEM54Q969K7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 AC025183.3-201ENST00000623526 1482 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 ELK2AP-201ENST00000392510 1007 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 AL391647.1-201ENST00000395664 511 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 NDUFB10P1-201ENST00000567319 521 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 MIR4525-201ENST00000580000 75 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 AL021707.6-201ENST00000609212 491 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 AC244093.1-201ENST00000610837 814 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.47□□□□□ -0.41
TMEM54Q969K7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM54Q969K7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TMEM54Q969K7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms