Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-CQ95604 GUCY2EP-203ENST00000531117 1918 ntBASIC14.47□□□□□ -0.09
HLA-CQ95604 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-CQ95604 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AC103702.1-201ENST00000548801 2630 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AC069421.1-201ENST00000447462 323 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 CT45A11P-201ENST00000448043 1134 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 AC113398.1-201ENST00000464124 406 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 RN7SL794P-201ENST00000469816 280 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-CQ95604 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-CQ95604 MIR5091-201ENST00000578707 93 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 SNX20-205ENST00000610485 557 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AC134878.2-201ENST00000620700 1265 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 AC079331.1-201ENST00000623200 1200 ntBASIC14.46□□□□□ -0.09
HLA-CQ95604 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC14.46□□□□□ -0.09
HLA-CQ95604 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-CQ95604 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HLA-CQ95604 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-CQ95604 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-CQ95604 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-CQ95604 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-CQ95604 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
HLA-CQ95604 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-CQ95604 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-CQ95604 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HLA-CQ95604 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HLA-CQ95604 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-CQ95604 PGK1P2-201ENST00000431702 1214 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 ACTG1P23-201ENST00000437653 1074 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
HLA-CQ95604 RN7SL69P-201ENST00000468423 272 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 AL450346.2-201ENST00000495602 1024 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-CQ95604 SRPK2P-201ENST00000523408 1100 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 OR4A49P-201ENST00000527050 632 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC14.45□□□□□ -0.1
HLA-CQ95604 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-CQ95604 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-CQ95604 AC009712.1-201ENST00000564938 316 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms