Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HERVK_113Q902F9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HERVK_113Q902F9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HERVK_113Q902F9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 AC138035.3-201ENST00000622706 2791 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.02■□□□□ -0
HERVK_113Q902F9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
HERVK_113Q902F9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HERVK_113Q902F9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HERVK_113Q902F9 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 OLA1P2-201ENST00000395519 1264 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.02■□□□□ -0
HERVK_113Q902F9 AC010086.2-201ENST00000428616 226 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 CCND3P1-201ENST00000438347 580 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.02■□□□□ -0
HERVK_113Q902F9 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC15.02■□□□□ -0
HERVK_113Q902F9 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC15.02■□□□□ -0
HERVK_113Q902F9 AC015818.1-201ENST00000451011 244 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 TPT1P6-201ENST00000458298 514 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 DPY19L2P4-201ENST00000479881 442 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 RPL29P2-201ENST00000488409 460 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 AC112250.1-201ENST00000504640 745 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 ISL1-203ENST00000511384 981 ntTSL 5 BASIC15.02■□□□□ -0
HERVK_113Q902F9 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.02■□□□□ -0
HERVK_113Q902F9 AC020922.4-201ENST00000621389 339 ntBASIC15.02■□□□□ -0
HERVK_113Q902F9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC15.02□□□□□ -0.01
HERVK_113Q902F9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 KRT18P33-201ENST00000398525 1043 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 OR7E155P-201ENST00000412208 1014 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 KRT18P44-201ENST00000416086 1285 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 IGKV1OR-2-201ENST00000457995 350 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 AC142086.5-202ENST00000562500 217 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 KF455155.1-201ENST00000604493 303 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 AC254633.1-201ENST00000606790 345 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 AL050341.2-201ENST00000567508 1541 ntBASIC15.01□□□□□ -0.01
HERVK_113Q902F9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HERVK_113Q902F9 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HERVK_113Q902F9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15□□□□□ -0.01
HERVK_113Q902F9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15□□□□□ -0.01
HERVK_113Q902F9 PES1P2-201ENST00000449745 1735 ntBASIC15□□□□□ -0.01
HERVK_113Q902F9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15□□□□□ -0.01
HERVK_113Q902F9 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC15□□□□□ -0.01
HERVK_113Q902F9 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms