Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AC138951.2-201ENST00000623455 1161 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RTN4IP1Q8WWV3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 AL590440.2-201ENST00000641973 1595 ntBASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 RN7SKP175-201ENST00000408472 289 ntBASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 OR10B1P-201ENST00000601666 907 ntBASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 AC006453.4-201ENST00000636949 1252 ntBASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 AL354989.2-201ENST00000435838 1540 ntBASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RTN4IP1Q8WWV3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AGAP12P-201ENST00000585227 2359 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.04□□□□□ -0.48
RTN4IP1Q8WWV3 ARSEP1-201ENST00000420443 635 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms