Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 MEX3B-202ENST00000558133 4333 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 AC009474.1-201ENST00000455096 1565 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 BTBD6P1-201ENST00000412176 1267 ntBASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 POM121L10P-201ENST00000436994 1285 ntBASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 HLA-J-204ENST00000495278 958 ntBASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 RN7SL560P-201ENST00000577943 264 ntBASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 AL096828.3-201ENST00000615354 462 ntBASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDKL3Q8IVW4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 MIR658-201ENST00000385210 100 ntBASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 MIR663B-201ENST00000408361 115 ntBASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 FAM86HP-204ENST00000513466 959 ntBASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 BNIP3P13-201ENST00000599968 566 ntBASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
CDKL3Q8IVW4 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms