Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CERKLQ49MI3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.52■□□□□ 0.23
CERKLQ49MI3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CERKLQ49MI3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CERKLQ49MI3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CERKLQ49MI3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CERKLQ49MI3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CERKLQ49MI3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CERKLQ49MI3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CERKLQ49MI3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CERKLQ49MI3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CERKLQ49MI3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CERKLQ49MI3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 GNG10P1-201ENST00000452289 199 ntBASIC16.51■□□□□ 0.23
CERKLQ49MI3 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 VENTXP3-201ENST00000546480 773 ntBASIC16.51■□□□□ 0.23
CERKLQ49MI3 AL132994.1-201ENST00000554098 400 ntBASIC16.51■□□□□ 0.23
CERKLQ49MI3 AL118522.1-201ENST00000611368 560 ntBASIC16.51■□□□□ 0.23
CERKLQ49MI3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CERKLQ49MI3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 CTBP2P8-201ENST00000422584 1330 ntBASIC16.5■□□□□ 0.23
CERKLQ49MI3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 RPL3P2-204ENST00000413027 1203 ntBASIC16.5■□□□□ 0.23
CERKLQ49MI3 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 AL157792.1-201ENST00000488281 530 ntBASIC16.5■□□□□ 0.23
CERKLQ49MI3 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 MIR4472-1-201ENST00000584349 80 ntBASIC16.5■□□□□ 0.23
CERKLQ49MI3 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CERKLQ49MI3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CERKLQ49MI3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms