Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAE1P78406 OR8T1P-201ENST00000421347 918 ntBASIC13.45□□□□□ -0.26
RAE1P78406 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.45□□□□□ -0.26
RAE1P78406 AC104306.2-201ENST00000451877 341 ntBASIC13.45□□□□□ -0.26
RAE1P78406 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.45□□□□□ -0.26
RAE1P78406 RCC2P8-201ENST00000502779 1035 ntBASIC13.45□□□□□ -0.26
RAE1P78406 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
RAE1P78406 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.45□□□□□ -0.26
RAE1P78406 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.45□□□□□ -0.26
RAE1P78406 RN7SL455P-201ENST00000580629 282 ntBASIC13.45□□□□□ -0.26
RAE1P78406 MIR3188-201ENST00000583494 85 ntBASIC13.45□□□□□ -0.26
RAE1P78406 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.45□□□□□ -0.26
RAE1P78406 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 AC239800.4-201ENST00000603712 296 ntBASIC13.45□□□□□ -0.26
RAE1P78406 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 AL008638.5-201ENST00000623814 1298 ntBASIC13.45□□□□□ -0.26
RAE1P78406 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 CICP8-201ENST00000455800 2813 ntBASIC13.45□□□□□ -0.26
RAE1P78406 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.45□□□□□ -0.26
RAE1P78406 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.45□□□□□ -0.26
RAE1P78406 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 CR383656.2-201ENST00000548656 2254 ntBASIC13.44□□□□□ -0.26
RAE1P78406 AL445250.1-201ENST00000641671 2259 ntBASIC13.44□□□□□ -0.26
RAE1P78406 AC108024.1-201ENST00000626286 1721 ntBASIC13.44□□□□□ -0.26
RAE1P78406 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.44□□□□□ -0.26
RAE1P78406 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.44□□□□□ -0.26
RAE1P78406 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
RAE1P78406 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.44□□□□□ -0.26
RAE1P78406 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RAE1P78406 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RAE1P78406 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 RNA5SP359-201ENST00000364838 113 ntBASIC13.44□□□□□ -0.26
RAE1P78406 GK-202ENST00000378941 458 ntTSL 3 BASIC13.44□□□□□ -0.26
RAE1P78406 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 MIR1908-201ENST00000410394 80 ntBASIC13.44□□□□□ -0.26
RAE1P78406 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.44□□□□□ -0.26
RAE1P78406 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.44□□□□□ -0.26
RAE1P78406 CHCHD2P2-201ENST00000503744 321 ntBASIC13.44□□□□□ -0.26
RAE1P78406 AC116345.2-201ENST00000512837 523 ntBASIC13.44□□□□□ -0.26
RAE1P78406 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.44□□□□□ -0.26
RAE1P78406 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
RAE1P78406 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 AL033527.4-201ENST00000641026 673 ntBASIC13.44□□□□□ -0.26
RAE1P78406 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RAE1P78406 AC099521.3-201ENST00000624251 2938 ntBASIC13.44□□□□□ -0.26
RAE1P78406 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RAE1P78406 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 AL365209.1-201ENST00000624418 6473 ntBASIC13.44□□□□□ -0.26
RAE1P78406 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.44□□□□□ -0.26
RAE1P78406 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.44□□□□□ -0.26
RAE1P78406 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 AC067931.2-201ENST00000623655 2003 ntBASIC13.44□□□□□ -0.26
RAE1P78406 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAE1P78406 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms