Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 AC005740.2-201ENST00000511085 419 ntBASIC12.43□□□□□ -0.42
HIST1H3AP68431 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 AC091271.1-201ENST00000611877 1162 ntBASIC12.43□□□□□ -0.42
HIST1H3AP68431 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.43□□□□□ -0.42
HIST1H3AP68431 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HIST1H3AP68431 CR383656.2-201ENST00000548656 2254 ntBASIC12.42□□□□□ -0.42
HIST1H3AP68431 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 AL391647.1-201ENST00000395664 511 ntBASIC12.42□□□□□ -0.42
HIST1H3AP68431 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 RPS2P32-201ENST00000439199 892 ntBASIC12.42□□□□□ -0.42
HIST1H3AP68431 EIF4HP1-201ENST00000453115 687 ntBASIC12.42□□□□□ -0.42
HIST1H3AP68431 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 AL008638.5-201ENST00000623814 1298 ntBASIC12.42□□□□□ -0.42
HIST1H3AP68431 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
HIST1H3AP68431 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms