Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
PSMD4P55036 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 ACTBP11-201ENST00000436287 1126 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 XBP1P1-201ENST00000436573 652 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 AC244107.1-201ENST00000442033 332 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 AC104306.2-201ENST00000451877 341 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 SCARNA21-201ENST00000517026 139 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.32□□□□□ -0.28
PSMD4P55036 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.32□□□□□ -0.28
PSMD4P55036 AC003686.1-201ENST00000550956 1034 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.32□□□□□ -0.28
PSMD4P55036 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.32□□□□□ -0.28
PSMD4P55036 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 AL022328.3-201ENST00000607943 679 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 AC022748.3-201ENST00000621828 275 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 AL008638.5-201ENST00000623814 1298 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PSMD4P55036 CYP4F23P-201ENST00000593402 1579 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PSMD4P55036 FAM90A7P-201ENST00000382628 1395 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 FAM90A23P-201ENST00000400136 1395 ntBASIC13.32□□□□□ -0.28
PSMD4P55036 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PSMD4P55036 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.31□□□□□ -0.28
PSMD4P55036 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
PSMD4P55036 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PSMD4P55036 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PSMD4P55036 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 AC078875.1-201ENST00000431907 724 ntBASIC13.31□□□□□ -0.28
PSMD4P55036 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 VDAC1P1-201ENST00000439229 848 ntBASIC13.31□□□□□ -0.28
PSMD4P55036 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.31□□□□□ -0.28
PSMD4P55036 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 AC013355.1-201ENST00000562625 723 ntBASIC13.31□□□□□ -0.28
PSMD4P55036 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.31□□□□□ -0.28
PSMD4P55036 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
PSMD4P55036 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.31□□□□□ -0.28
PSMD4P55036 AC068587.8-201ENST00000641239 219 ntBASIC13.31□□□□□ -0.28
PSMD4P55036 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PSMD4P55036 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PSMD4P55036 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
PSMD4P55036 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PSMD4P55036 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PSMD4P55036 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PSMD4P55036 AC018629.1-201ENST00000623381 1736 ntBASIC13.3□□□□□ -0.28
PSMD4P55036 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.3□□□□□ -0.28
PSMD4P55036 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms