Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.59□□□□□ -0.39
CCR9P51686 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.59□□□□□ -0.39
CCR9P51686 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.59□□□□□ -0.39
CCR9P51686 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.59□□□□□ -0.39
CCR9P51686 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCR9P51686 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.59□□□□□ -0.39
CCR9P51686 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.59□□□□□ -0.39
CCR9P51686 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCR9P51686 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CCR9P51686 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.59□□□□□ -0.39
CCR9P51686 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCR9P51686 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCR9P51686 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.58□□□□□ -0.39
CCR9P51686 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
CCR9P51686 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCR9P51686 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CCR9P51686 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCR9P51686 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCR9P51686 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CCR9P51686 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 MIR770-201ENST00000390219 98 ntBASIC12.58□□□□□ -0.4
CCR9P51686 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.58□□□□□ -0.4
CCR9P51686 ST13P19-201ENST00000442505 1124 ntBASIC12.58□□□□□ -0.4
CCR9P51686 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 COX5BP1-201ENST00000507622 393 ntBASIC12.58□□□□□ -0.4
CCR9P51686 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.58□□□□□ -0.4
CCR9P51686 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.58□□□□□ -0.4
CCR9P51686 RN7SL204P-201ENST00000582831 262 ntBASIC12.58□□□□□ -0.4
CCR9P51686 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.58□□□□□ -0.4
CCR9P51686 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 AC073413.1-201ENST00000603927 732 ntBASIC12.58□□□□□ -0.4
CCR9P51686 ZACNP1-201ENST00000612259 710 ntBASIC12.58□□□□□ -0.4
CCR9P51686 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CCR9P51686 AC006453.4-201ENST00000636949 1252 ntBASIC12.58□□□□□ -0.4
CCR9P51686 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CCR9P51686 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 AGAP12P-201ENST00000585227 2359 ntBASIC12.58□□□□□ -0.4
CCR9P51686 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.58□□□□□ -0.4
CCR9P51686 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CCR9P51686 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.58□□□□□ -0.4
CCR9P51686 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CCR9P51686 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCR9P51686 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCR9P51686 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CCR9P51686 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.57□□□□□ -0.4
CCR9P51686 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
CCR9P51686 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCR9P51686 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.57□□□□□ -0.4
CCR9P51686 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCR9P51686 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.57□□□□□ -0.4
CCR9P51686 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CCR9P51686 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CCR9P51686 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CCR9P51686 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.57□□□□□ -0.4
CCR9P51686 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCR9P51686 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms