Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.66■□□□□ 0.1
GPC3P51654 NDUFB10P1-201ENST00000567319 521 ntBASIC15.66■□□□□ 0.1
GPC3P51654 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 AL021707.6-201ENST00000609212 491 ntBASIC15.66■□□□□ 0.1
GPC3P51654 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
GPC3P51654 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
GPC3P51654 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
GPC3P51654 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GPC3P51654 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.65■□□□□ 0.1
GPC3P51654 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.65■□□□□ 0.1
GPC3P51654 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
GPC3P51654 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GPC3P51654 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
GPC3P51654 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GPC3P51654 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.65■□□□□ 0.1
GPC3P51654 AC006987.1-201ENST00000413610 527 ntBASIC15.65■□□□□ 0.1
GPC3P51654 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.65■□□□□ 0.1
GPC3P51654 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.65■□□□□ 0.1
GPC3P51654 AC079112.1-201ENST00000454972 939 ntBASIC15.65■□□□□ 0.1
GPC3P51654 RN7SL8P-201ENST00000461771 266 ntBASIC15.65■□□□□ 0.1
GPC3P51654 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.65■□□□□ 0.1
GPC3P51654 AC005740.1-201ENST00000515639 522 ntBASIC15.65■□□□□ 0.1
GPC3P51654 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.65■□□□□ 0.1
GPC3P51654 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.65■□□□□ 0.1
GPC3P51654 AC138701.2-201ENST00000553634 226 ntBASIC15.65■□□□□ 0.1
GPC3P51654 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.65■□□□□ 0.1
GPC3P51654 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
GPC3P51654 AC005618.3-201ENST00000624928 458 ntBASIC15.65■□□□□ 0.1
GPC3P51654 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
GPC3P51654 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
GPC3P51654 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.65■□□□□ 0.1
GPC3P51654 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
GPC3P51654 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GPC3P51654 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.65■□□□□ 0.1
GPC3P51654 TEKT4P2-202ENST00000559466 1312 ntBASIC15.65■□□□□ 0.1
GPC3P51654 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
GPC3P51654 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.65■□□□□ 0.1
GPC3P51654 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.64■□□□□ 0.09
GPC3P51654 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.64■□□□□ 0.09
GPC3P51654 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.64■□□□□ 0.09
GPC3P51654 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.64■□□□□ 0.09
GPC3P51654 AC006372.4-201ENST00000624122 1543 ntBASIC15.64■□□□□ 0.09
GPC3P51654 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GPC3P51654 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GPC3P51654 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.64■□□□□ 0.09
GPC3P51654 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.64■□□□□ 0.09
GPC3P51654 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.64■□□□□ 0.09
GPC3P51654 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.64■□□□□ 0.09
GPC3P51654 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.64■□□□□ 0.09
GPC3P51654 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.64■□□□□ 0.09
GPC3P51654 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.64■□□□□ 0.09
GPC3P51654 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
GPC3P51654 KRT8P24-201ENST00000560290 1559 ntBASIC15.64■□□□□ 0.09
GPC3P51654 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.64■□□□□ 0.09
GPC3P51654 SIGLEC22P-201ENST00000599104 714 ntBASIC15.64■□□□□ 0.09
GPC3P51654 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.64■□□□□ 0.09
GPC3P51654 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.64■□□□□ 0.09
GPC3P51654 AC090643.2-201ENST00000623442 2029 ntBASIC15.64■□□□□ 0.09
GPC3P51654 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
GPC3P51654 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 AC011474.4-201ENST00000623523 2076 ntBASIC15.64■□□□□ 0.09
GPC3P51654 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.64■□□□□ 0.09
GPC3P51654 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GPC3P51654 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
GPC3P51654 MST1P2-201ENST00000457982 2291 ntBASIC15.64■□□□□ 0.09
GPC3P51654 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms