Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1DP48730 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1DP48730 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.16□□□□□ -0.14
CSNK1DP48730 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 AC093462.1-201ENST00000621167 1683 ntBASIC14.16□□□□□ -0.14
CSNK1DP48730 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CSNK1DP48730 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.16□□□□□ -0.14
CSNK1DP48730 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CSNK1DP48730 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 AC074138.1-201ENST00000611182 1303 ntBASIC14.15□□□□□ -0.14
CSNK1DP48730 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 FMO6P-201ENST00000236166 1620 ntBASIC14.15□□□□□ -0.14
CSNK1DP48730 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 AL512430.1-201ENST00000392575 860 ntBASIC14.15□□□□□ -0.14
CSNK1DP48730 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 GUSBP10-201ENST00000417412 665 ntBASIC14.15□□□□□ -0.14
CSNK1DP48730 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.15□□□□□ -0.14
CSNK1DP48730 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.15□□□□□ -0.14
CSNK1DP48730 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.15□□□□□ -0.14
CSNK1DP48730 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 AL031713.1-201ENST00000564813 661 ntBASIC14.15□□□□□ -0.14
CSNK1DP48730 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.15□□□□□ -0.14
CSNK1DP48730 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.15□□□□□ -0.14
CSNK1DP48730 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 LINC02486-201ENST00000604157 3000 ntBASIC14.15□□□□□ -0.14
CSNK1DP48730 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 AGAP10P-201ENST00000454844 2418 ntBASIC14.15□□□□□ -0.14
CSNK1DP48730 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CSNK1DP48730 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.15□□□□□ -0.14
CSNK1DP48730 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.15□□□□□ -0.14
CSNK1DP48730 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CSNK1DP48730 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CSNK1DP48730 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1DP48730 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.14□□□□□ -0.15
CSNK1DP48730 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1DP48730 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1DP48730 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.14□□□□□ -0.15
CSNK1DP48730 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CSNK1DP48730 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CSNK1DP48730 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CSNK1DP48730 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms