Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.72■□□□□ 0.11
TM4SF4P48230 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.72■□□□□ 0.11
TM4SF4P48230 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TM4SF4P48230 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TM4SF4P48230 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.71■□□□□ 0.11
TM4SF4P48230 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 CICP6-201ENST00000457191 2729 ntBASIC15.71■□□□□ 0.11
TM4SF4P48230 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC15.71■□□□□ 0.11
TM4SF4P48230 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.71■□□□□ 0.11
TM4SF4P48230 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 PMF1-201ENST00000368273 884 ntTSL 2 BASIC15.71■□□□□ 0.11
TM4SF4P48230 RBMXP1-201ENST00000408004 1191 ntBASIC15.71■□□□□ 0.11
TM4SF4P48230 AL627095.1-201ENST00000414775 321 ntBASIC15.71■□□□□ 0.11
TM4SF4P48230 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC15.71■□□□□ 0.11
TM4SF4P48230 RPL3P9-201ENST00000463217 1183 ntBASIC15.71■□□□□ 0.11
TM4SF4P48230 JPT1-205ENST00000470924 663 ntTSL 5 BASIC15.71■□□□□ 0.11
TM4SF4P48230 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC15.71■□□□□ 0.11
TM4SF4P48230 AACSP1-202ENST00000521412 1095 ntBASIC15.71■□□□□ 0.11
TM4SF4P48230 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC15.71■□□□□ 0.11
TM4SF4P48230 METTL7AP1-201ENST00000547343 496 ntBASIC15.71■□□□□ 0.11
TM4SF4P48230 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC15.71■□□□□ 0.11
TM4SF4P48230 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
TM4SF4P48230 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.71■□□□□ 0.11
TM4SF4P48230 MDC1-209ENST00000613547 830 ntTSL 5 BASIC15.71■□□□□ 0.11
TM4SF4P48230 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TM4SF4P48230 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TM4SF4P48230 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.71■□□□□ 0.11
TM4SF4P48230 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TM4SF4P48230 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TM4SF4P48230 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.71■□□□□ 0.1
TM4SF4P48230 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.71■□□□□ 0.1
TM4SF4P48230 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TM4SF4P48230 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TM4SF4P48230 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TM4SF4P48230 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
TM4SF4P48230 AC090505.1-201ENST00000430515 1834 ntBASIC15.71■□□□□ 0.1
TM4SF4P48230 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 AC084018.2-201ENST00000613093 2607 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TM4SF4P48230 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TM4SF4P48230 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.7■□□□□ 0.1
TM4SF4P48230 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC15.7■□□□□ 0.1
TM4SF4P48230 AL031577.1-201ENST00000339867 399 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 SNORA50D-201ENST00000408059 134 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 AC074019.1-201ENST00000428788 1096 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 ASLP1-201ENST00000428790 637 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC15.7■□□□□ 0.1
TM4SF4P48230 RN7SL87P-201ENST00000497657 288 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 AC114812.4-201ENST00000506676 757 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 HAX1-211ENST00000532105 771 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 AL136298.3-201ENST00000556746 445 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 MIR4309-201ENST00000582498 83 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC15.7■□□□□ 0.1
TM4SF4P48230 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC15.7■□□□□ 0.1
TM4SF4P48230 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TM4SF4P48230 SNORA50D-202ENST00000627561 132 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 CDIPT-AS1-203ENST00000638164 713 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
TM4SF4P48230 AC245140.2-201ENST00000624054 1939 ntBASIC15.7■□□□□ 0.1
TM4SF4P48230 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TM4SF4P48230 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.7■□□□□ 0.1
TM4SF4P48230 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms