Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 AC009093.10-201ENST00000641956 1442 ntBASIC11.72□□□□□ -0.53
NKX2-1P43699 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-1P43699 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NKX2-1P43699 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-1P43699 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
NKX2-1P43699 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NKX2-1P43699 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
NKX2-1P43699 AC092580.3-201ENST00000430932 139 ntBASIC11.72□□□□□ -0.53
NKX2-1P43699 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-1P43699 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.72□□□□□ -0.53
NKX2-1P43699 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 GNAQP1-201ENST00000444815 1067 ntBASIC11.72□□□□□ -0.53
NKX2-1P43699 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
NKX2-1P43699 AC009477.1-201ENST00000452936 217 ntBASIC11.72□□□□□ -0.53
NKX2-1P43699 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.72□□□□□ -0.53
NKX2-1P43699 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.72□□□□□ -0.53
NKX2-1P43699 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NKX2-1P43699 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NKX2-1P43699 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.72□□□□□ -0.53
NKX2-1P43699 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.71□□□□□ -0.53
NKX2-1P43699 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 CICP1-201ENST00000416803 2410 ntBASIC11.71□□□□□ -0.53
NKX2-1P43699 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-1P43699 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-1P43699 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-1P43699 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-1P43699 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-1P43699 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-1P43699 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
NKX2-1P43699 KRT8P28-201ENST00000433288 1390 ntBASIC11.71□□□□□ -0.53
NKX2-1P43699 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
NKX2-1P43699 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-1P43699 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
NKX2-1P43699 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.71□□□□□ -0.53
NKX2-1P43699 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-1P43699 KRT18P25-201ENST00000508931 1278 ntBASIC11.71□□□□□ -0.53
NKX2-1P43699 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.71□□□□□ -0.53
NKX2-1P43699 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.71□□□□□ -0.53
NKX2-1P43699 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
NKX2-1P43699 TPRX2P-201ENST00000535362 881 ntBASIC11.71□□□□□ -0.53
NKX2-1P43699 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.71□□□□□ -0.53
NKX2-1P43699 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.71□□□□□ -0.53
NKX2-1P43699 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
NKX2-1P43699 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.71□□□□□ -0.53
NKX2-1P43699 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.71□□□□□ -0.53
NKX2-1P43699 AC006538.3-201ENST00000612495 578 ntBASIC11.71□□□□□ -0.53
NKX2-1P43699 CR392039.2-201ENST00000623182 509 ntBASIC11.71□□□□□ -0.53
NKX2-1P43699 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NKX2-1P43699 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
NKX2-1P43699 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-1P43699 AC026271.4-201ENST00000578214 1833 ntBASIC11.71□□□□□ -0.54
NKX2-1P43699 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
NKX2-1P43699 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
NKX2-1P43699 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
NKX2-1P43699 CIC-204ENST00000572681 8218 ntTSL 5 BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms