Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FDFT1P37268 SCARNA21-201ENST00000517026 139 ntBASIC14.54□□□□□ -0.08
FDFT1P37268 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.54□□□□□ -0.08
FDFT1P37268 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.54□□□□□ -0.08
FDFT1P37268 AP005482.1-201ENST00000563722 1273 ntBASIC14.54□□□□□ -0.08
FDFT1P37268 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.54□□□□□ -0.08
FDFT1P37268 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.54□□□□□ -0.08
FDFT1P37268 AC005324.6-201ENST00000587972 613 ntBASIC14.54□□□□□ -0.08
FDFT1P37268 AC008805.1-201ENST00000590892 364 ntBASIC14.54□□□□□ -0.08
FDFT1P37268 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FDFT1P37268 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FDFT1P37268 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FDFT1P37268 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FDFT1P37268 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
FDFT1P37268 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.54□□□□□ -0.08
FDFT1P37268 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.54□□□□□ -0.08
FDFT1P37268 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.54□□□□□ -0.08
FDFT1P37268 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.54□□□□□ -0.08
FDFT1P37268 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
FDFT1P37268 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FDFT1P37268 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FDFT1P37268 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FDFT1P37268 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
FDFT1P37268 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 AL591122.2-201ENST00000624125 1853 ntBASIC14.53□□□□□ -0.08
FDFT1P37268 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
FDFT1P37268 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 KRT8P29-201ENST00000420409 1371 ntBASIC14.53□□□□□ -0.08
FDFT1P37268 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 MTX1P1-201ENST00000440904 838 ntBASIC14.53□□□□□ -0.08
FDFT1P37268 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.53□□□□□ -0.08
FDFT1P37268 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.53□□□□□ -0.08
FDFT1P37268 AC133552.6-201ENST00000613406 534 ntBASIC14.53□□□□□ -0.08
FDFT1P37268 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.53□□□□□ -0.08
FDFT1P37268 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.53□□□□□ -0.08
FDFT1P37268 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FDFT1P37268 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
FDFT1P37268 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
FDFT1P37268 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FDFT1P37268 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.53□□□□□ -0.08
FDFT1P37268 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
FDFT1P37268 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.52□□□□□ -0.08
FDFT1P37268 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.52□□□□□ -0.08
FDFT1P37268 AP002353.1-201ENST00000528257 1599 ntBASIC14.52□□□□□ -0.08
FDFT1P37268 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
FDFT1P37268 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
FDFT1P37268 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.52□□□□□ -0.08
FDFT1P37268 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
FDFT1P37268 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.52□□□□□ -0.08
FDFT1P37268 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.52□□□□□ -0.09
FDFT1P37268 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FDFT1P37268 POM121L10P-201ENST00000436994 1285 ntBASIC14.52□□□□□ -0.09
FDFT1P37268 VDAC1P1-201ENST00000439229 848 ntBASIC14.52□□□□□ -0.09
FDFT1P37268 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.52□□□□□ -0.09
FDFT1P37268 GPR53P-205ENST00000457298 1084 ntBASIC14.52□□□□□ -0.09
FDFT1P37268 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.52□□□□□ -0.09
FDFT1P37268 RPL18P13-201ENST00000478088 569 ntBASIC14.52□□□□□ -0.09
FDFT1P37268 AC021723.1-201ENST00000486306 515 ntBASIC14.52□□□□□ -0.09
FDFT1P37268 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.52□□□□□ -0.09
FDFT1P37268 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.52□□□□□ -0.09
FDFT1P37268 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.52□□□□□ -0.09
FDFT1P37268 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.52□□□□□ -0.09
FDFT1P37268 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.52□□□□□ -0.09
FDFT1P37268 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms