Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 LRRC59-203ENST00000576448 1531 ntBASIC10.52□□□□□ -0.73
CKS2P33552 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 AL138725.1-201ENST00000407347 1314 ntBASIC10.52□□□□□ -0.73
CKS2P33552 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC10.52□□□□□ -0.73
CKS2P33552 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CKS2P33552 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CKS2P33552 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CKS2P33552 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 F10-203ENST00000409306 1450 ntTSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 AGGF1P10-201ENST00000635005 2191 ntBASIC10.51□□□□□ -0.73
CKS2P33552 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CKS2P33552 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 MEIS3P1-201ENST00000495167 958 ntBASIC10.51□□□□□ -0.73
CKS2P33552 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.51□□□□□ -0.73
CKS2P33552 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.51□□□□□ -0.73
CKS2P33552 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 TEX28P1-201ENST00000613479 1221 ntBASIC10.51□□□□□ -0.73
CKS2P33552 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.51□□□□□ -0.73
CKS2P33552 TEX28P2-201ENST00000617764 1221 ntBASIC10.51□□□□□ -0.73
CKS2P33552 AP001002.3-201ENST00000623482 206 ntBASIC10.51□□□□□ -0.73
CKS2P33552 AC004840.1-201ENST00000636359 365 ntBASIC10.51□□□□□ -0.73
CKS2P33552 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC10.51□□□□□ -0.73
CKS2P33552 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC10.51□□□□□ -0.73
CKS2P33552 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CKS2P33552 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC10.5□□□□□ -0.73
CKS2P33552 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms