Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH3P22223 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.07□□□□□ -0.16
CDH3P22223 AL132994.2-201ENST00000603120 687 ntBASIC14.07□□□□□ -0.16
CDH3P22223 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH3P22223 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDH3P22223 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CDH3P22223 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.07□□□□□ -0.16
CDH3P22223 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 FAM90A7P-201ENST00000382628 1395 ntBASIC14.07□□□□□ -0.16
CDH3P22223 FAM90A23P-201ENST00000400136 1395 ntBASIC14.07□□□□□ -0.16
CDH3P22223 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH3P22223 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.07□□□□□ -0.16
CDH3P22223 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDH3P22223 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.07□□□□□ -0.16
CDH3P22223 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 TMBIM7P-202ENST00000641474 1516 ntBASIC14.06□□□□□ -0.16
CDH3P22223 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDH3P22223 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CDH3P22223 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH3P22223 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.06□□□□□ -0.16
CDH3P22223 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH3P22223 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH3P22223 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.06□□□□□ -0.16
CDH3P22223 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH3P22223 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.06□□□□□ -0.16
CDH3P22223 AC009779.1-201ENST00000551138 283 ntBASIC14.06□□□□□ -0.16
CDH3P22223 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.06□□□□□ -0.16
CDH3P22223 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.06□□□□□ -0.16
CDH3P22223 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 NAP1L6-202ENST00000641404 1222 ntBASIC14.06□□□□□ -0.16
CDH3P22223 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 AL157791.1-201ENST00000553667 1699 ntBASIC14.06□□□□□ -0.16
CDH3P22223 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDH3P22223 KHSRPP1-201ENST00000427983 1768 ntBASIC14.06□□□□□ -0.16
CDH3P22223 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDH3P22223 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms