Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
RAB3BP20337 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.53□□□□□ -0.4
RAB3BP20337 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB3BP20337 INE1-201ENST00000456273 945 ntBASIC12.53□□□□□ -0.4
RAB3BP20337 AC068587.3-201ENST00000526613 355 ntBASIC12.53□□□□□ -0.4
RAB3BP20337 AL359711.2-201ENST00000563105 872 ntBASIC12.53□□□□□ -0.4
RAB3BP20337 AC004449.1-201ENST00000564240 433 ntBASIC12.53□□□□□ -0.4
RAB3BP20337 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB3BP20337 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB3BP20337 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 AC002472.3-201ENST00000640124 621 ntBASIC12.53□□□□□ -0.4
RAB3BP20337 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 AC073862.5-201ENST00000624129 2027 ntBASIC12.53□□□□□ -0.4
RAB3BP20337 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB3BP20337 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB3BP20337 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB3BP20337 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB3BP20337 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB3BP20337 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB3BP20337 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB3BP20337 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
RAB3BP20337 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB3BP20337 AGGF1P10-201ENST00000635005 2191 ntBASIC12.52□□□□□ -0.4
RAB3BP20337 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RAB3BP20337 VENTXP1-201ENST00000569334 2716 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB3BP20337 ACKR1-201ENST00000368121 1240 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB3BP20337 POM121L8P-201ENST00000417732 1281 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB3BP20337 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB3BP20337 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.52□□□□□ -0.41
RAB3BP20337 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB3BP20337 POM121L9P-203ENST00000441984 1285 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 AP006288.1-201ENST00000446065 395 ntBASIC12.52□□□□□ -0.41
RAB3BP20337 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB3BP20337 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB3BP20337 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.52□□□□□ -0.41
RAB3BP20337 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB3BP20337 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB3BP20337 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms