Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 MIR3615-201ENST00000581999 87 ntBASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 LINC01815-202ENST00000641468 1409 ntBASIC14.38□□□□□ -0.11
HLA-DPA1P20036 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 LINC02486-201ENST00000604157 3000 ntBASIC14.38□□□□□ -0.11
HLA-DPA1P20036 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.38□□□□□ -0.11
HLA-DPA1P20036 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPA1P20036 RPL13AP3-202ENST00000494676 1473 ntBASIC14.38□□□□□ -0.11
HLA-DPA1P20036 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AGAP10P-201ENST00000454844 2418 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AC005840.4-201ENST00000541242 2494 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 EIF4HP1-201ENST00000453115 687 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 GOLGA2P8-201ENST00000505201 779 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AP001258.2-201ENST00000529891 490 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AC093752.3-201ENST00000567343 901 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AC026740.1-201ENST00000607068 791 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 AC111170.3-201ENST00000624282 2464 ntBASIC14.37□□□□□ -0.11
HLA-DPA1P20036 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HLA-DPA1P20036 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DPA1P20036 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms