Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NCLP19338 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.1■□□□□ 0.33
NCLP19338 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NCLP19338 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NCLP19338 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
NCLP19338 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
NCLP19338 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.09■□□□□ 0.33
NCLP19338 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.09■□□□□ 0.33
NCLP19338 AL162726.2-201ENST00000438986 1017 ntBASIC17.09■□□□□ 0.33
NCLP19338 FO681548.1-201ENST00000455617 1132 ntBASIC17.09■□□□□ 0.33
NCLP19338 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.09■□□□□ 0.33
NCLP19338 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.09■□□□□ 0.33
NCLP19338 RAB43P1-201ENST00000561790 589 ntBASIC17.09■□□□□ 0.33
NCLP19338 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.09■□□□□ 0.33
NCLP19338 AC008735.3-201ENST00000596646 500 ntBASIC17.09■□□□□ 0.33
NCLP19338 AC017083.2-201ENST00000608069 979 ntBASIC17.09■□□□□ 0.33
NCLP19338 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.09■□□□□ 0.33
NCLP19338 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NCLP19338 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.09■□□□□ 0.33
NCLP19338 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 POM121L4P-202ENST00000427789 1891 ntBASIC17.09■□□□□ 0.33
NCLP19338 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.09■□□□□ 0.33
NCLP19338 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 AC005014.1-201ENST00000432006 2976 ntBASIC17.09■□□□□ 0.33
NCLP19338 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC17.09■□□□□ 0.33
NCLP19338 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NCLP19338 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NCLP19338 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC17.08■□□□□ 0.33
NCLP19338 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.08■□□□□ 0.33
NCLP19338 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC17.08■□□□□ 0.33
NCLP19338 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
NCLP19338 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NCLP19338 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.08■□□□□ 0.32
NCLP19338 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.08■□□□□ 0.32
NCLP19338 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.08■□□□□ 0.32
NCLP19338 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NCLP19338 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NCLP19338 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NCLP19338 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NCLP19338 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.08■□□□□ 0.32
NCLP19338 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.08■□□□□ 0.32
NCLP19338 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.08■□□□□ 0.32
NCLP19338 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NCLP19338 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NCLP19338 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 AC124283.3-201ENST00000570869 594 ntBASIC17.08■□□□□ 0.32
NCLP19338 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NCLP19338 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NCLP19338 MIR6752-201ENST00000618442 71 ntBASIC17.08■□□□□ 0.32
NCLP19338 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC17.08■□□□□ 0.32
NCLP19338 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCLP19338 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NCLP19338 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms