Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATF3P18847 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATF3P18847 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATF3P18847 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.1■□□□□ 0.65
ATF3P18847 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.1■□□□□ 0.65
ATF3P18847 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.1■□□□□ 0.65
ATF3P18847 KRT8P25-201ENST00000473150 1456 ntBASIC19.09■□□□□ 0.65
ATF3P18847 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
ATF3P18847 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ATF3P18847 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF3P18847 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 RPL4P6-201ENST00000438116 1304 ntBASIC19.09■□□□□ 0.65
ATF3P18847 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 HSD3BP1-201ENST00000286193 1111 ntBASIC19.09■□□□□ 0.65
ATF3P18847 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 CFL1P6-201ENST00000400899 494 ntBASIC19.09■□□□□ 0.65
ATF3P18847 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC19.09■□□□□ 0.65
ATF3P18847 CRIP1P2-201ENST00000425396 228 ntBASIC19.09■□□□□ 0.65
ATF3P18847 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF3P18847 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF3P18847 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC19.09■□□□□ 0.65
ATF3P18847 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC19.09■□□□□ 0.65
ATF3P18847 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC19.09■□□□□ 0.65
ATF3P18847 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC19.09■□□□□ 0.65
ATF3P18847 AC091691.1-201ENST00000583587 1018 ntBASIC19.09■□□□□ 0.65
ATF3P18847 AC137723.2-201ENST00000623540 398 ntBASIC19.09■□□□□ 0.65
ATF3P18847 COG6-212ENST00000630730 186 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF3P18847 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF3P18847 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC19.09■□□□□ 0.65
ATF3P18847 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ATF3P18847 POLL-206ENST00000370172 2308 ntTSL 2 BASIC19.09■□□□□ 0.65
ATF3P18847 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATF3P18847 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC19.09■□□□□ 0.65
ATF3P18847 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATF3P18847 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
ATF3P18847 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.08■□□□□ 0.65
ATF3P18847 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC19.08■□□□□ 0.65
ATF3P18847 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ATF3P18847 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
ATF3P18847 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATF3P18847 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
ATF3P18847 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ATF3P18847 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
ATF3P18847 NDUFB2P1-201ENST00000506966 295 ntBASIC19.08■□□□□ 0.64
ATF3P18847 TMA16-204ENST00000508268 608 ntTSL 2 BASIC19.08■□□□□ 0.64
ATF3P18847 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC19.08■□□□□ 0.64
ATF3P18847 AC120498.5-201ENST00000561757 299 ntBASIC19.08■□□□□ 0.64
ATF3P18847 ABCD1P3-201ENST00000562927 605 ntBASIC19.08■□□□□ 0.64
ATF3P18847 TPST2P1-201ENST00000564073 1102 ntBASIC19.08■□□□□ 0.64
ATF3P18847 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC19.08■□□□□ 0.64
ATF3P18847 AC138627.1-201ENST00000641127 1257 ntBASIC19.08■□□□□ 0.64
ATF3P18847 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC19.08■□□□□ 0.64
ATF3P18847 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ATF3P18847 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
ATF3P18847 AL513477.1-201ENST00000602865 2407 ntBASIC19.08■□□□□ 0.64
ATF3P18847 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATF3P18847 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.07■□□□□ 0.64
ATF3P18847 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.07■□□□□ 0.64
ATF3P18847 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF3P18847 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ATF3P18847 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF3P18847 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATF3P18847 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATF3P18847 AL022313.4-201ENST00000562756 2046 ntBASIC19.07■□□□□ 0.64
ATF3P18847 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.07■□□□□ 0.64
ATF3P18847 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF3P18847 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC19.07■□□□□ 0.64
ATF3P18847 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC19.07■□□□□ 0.64
ATF3P18847 AC113398.1-201ENST00000464124 406 ntBASIC19.07■□□□□ 0.64
ATF3P18847 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATF3P18847 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms