Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA4P06727 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA4P06727 KRT8P29-201ENST00000420409 1371 ntBASIC14.32□□□□□ -0.12
APOA4P06727 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA4P06727 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
APOA4P06727 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA4P06727 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA4P06727 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
APOA4P06727 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
APOA4P06727 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA4P06727 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
APOA4P06727 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 MIR663B-201ENST00000408361 115 ntBASIC14.31□□□□□ -0.12
APOA4P06727 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.31□□□□□ -0.12
APOA4P06727 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.31□□□□□ -0.12
APOA4P06727 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.31□□□□□ -0.12
APOA4P06727 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.31□□□□□ -0.12
APOA4P06727 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 AL096828.3-201ENST00000615354 462 ntBASIC14.31□□□□□ -0.12
APOA4P06727 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.31□□□□□ -0.12
APOA4P06727 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 Z98259.2-201ENST00000641583 609 ntBASIC14.31□□□□□ -0.12
APOA4P06727 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA4P06727 MIR193BHG-211ENST00000641433 5365 ntBASIC14.31□□□□□ -0.12
APOA4P06727 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
APOA4P06727 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA4P06727 AC135782.3-201ENST00000562782 2105 ntBASIC14.3□□□□□ -0.12
APOA4P06727 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 MARK2P9-201ENST00000430958 1727 ntBASIC14.3□□□□□ -0.12
APOA4P06727 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 AC107918.4-201ENST00000641966 3141 ntBASIC14.3□□□□□ -0.12
APOA4P06727 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.3□□□□□ -0.12
APOA4P06727 BRWD1P1-201ENST00000401091 371 ntBASIC14.3□□□□□ -0.12
APOA4P06727 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA4P06727 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.3□□□□□ -0.12
APOA4P06727 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
APOA4P06727 KLF2P1-201ENST00000447438 1042 ntBASIC14.3□□□□□ -0.12
APOA4P06727 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.3□□□□□ -0.12
APOA4P06727 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA4P06727 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.3□□□□□ -0.12
APOA4P06727 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA4P06727 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA4P06727 AC104982.3-201ENST00000581995 514 ntBASIC14.3□□□□□ -0.12
APOA4P06727 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms