Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC010997.1-201ENST00000447646 350 ntBASIC8.45□□□□□ -1.06
APOBP04114 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
APOBP04114 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 HMGA1P1-201ENST00000415560 1062 ntBASIC8.45□□□□□ -1.06
APOBP04114 ACP1-207ENST00000439645 605 ntTSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 AC091691.1-201ENST00000583587 1018 ntBASIC8.45□□□□□ -1.06
APOBP04114 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC8.45□□□□□ -1.06
APOBP04114 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 ATF4P4-201ENST00000393544 1930 ntBASIC8.45□□□□□ -1.06
APOBP04114 AC113367.3-201ENST00000508316 1912 ntBASIC8.45□□□□□ -1.06
APOBP04114 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 AC008741.2-201ENST00000612792 3115 ntBASIC8.45□□□□□ -1.06
APOBP04114 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC8.45□□□□□ -1.06
APOBP04114 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 AC007274.3-201ENST00000619838 385 ntBASIC8.45□□□□□ -1.06
APOBP04114 AC138430.2-201ENST00000624068 504 ntBASIC8.45□□□□□ -1.06
APOBP04114 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 HSPA7-201ENST00000445535 1927 ntBASIC8.45□□□□□ -1.06
APOBP04114 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 MBP-202ENST00000355994 2772 ntTSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC8.44□□□□□ -1.06
APOBP04114 SNORD55-201ENST00000581525 80 ntBASIC8.44□□□□□ -1.06
APOBP04114 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 AL109954.3-201ENST00000615088 558 ntBASIC8.44□□□□□ -1.06
APOBP04114 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 AC106872.9-201ENST00000512437 1393 ntBASIC8.44□□□□□ -1.06
APOBP04114 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
APOBP04114 RNA5SP407-201ENST00000410275 110 ntBASIC8.44□□□□□ -1.06
APOBP04114 CLK2P1-201ENST00000416636 1294 ntBASIC8.44□□□□□ -1.06
APOBP04114 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
APOBP04114 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC8.44□□□□□ -1.06
APOBP04114 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC8.44□□□□□ -1.06
APOBP04114 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 HNRNPA1P9-201ENST00000450624 950 ntBASIC8.44□□□□□ -1.06
APOBP04114 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 AC104212.2-201ENST00000478813 628 ntBASIC8.44□□□□□ -1.06
APOBP04114 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
APOBP04114 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 KRT18P8-201ENST00000581937 1246 ntBASIC8.44□□□□□ -1.06
APOBP04114 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
APOBP04114 AL356740.1-201ENST00000602192 1297 ntBASIC8.44□□□□□ -1.06
APOBP04114 AC211476.2-201ENST00000608799 708 ntBASIC8.44□□□□□ -1.06
APOBP04114 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms