Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 AC012618.1-201ENST00000461223 412 ntBASIC11.01□□□□□ -0.65
TRBV12-3P01733 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 RERG-205ENST00000537647 935 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 BAP1-211ENST00000615113 489 ntBASIC11.01□□□□□ -0.65
TRBV12-3P01733 AP001505.2-201ENST00000616815 443 ntBASIC11.01□□□□□ -0.65
TRBV12-3P01733 AL139099.5-201ENST00000635274 300 ntBASIC11.01□□□□□ -0.65
TRBV12-3P01733 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 AC010327.5-201ENST00000586923 3061 ntBASIC11.01□□□□□ -0.65
TRBV12-3P01733 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TRBV12-3P01733 GRK6P1-201ENST00000400595 1711 ntBASIC11.01□□□□□ -0.65
TRBV12-3P01733 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC11.01□□□□□ -0.65
TRBV12-3P01733 LINC01815-202ENST00000641468 1409 ntBASIC11.01□□□□□ -0.65
TRBV12-3P01733 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 RET-205ENST00000615310 4337 ntTSL 5 BASIC11□□□□□ -0.65
TRBV12-3P01733 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
TRBV12-3P01733 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
TRBV12-3P01733 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11□□□□□ -0.65
TRBV12-3P01733 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 OR8T1P-201ENST00000421347 918 ntBASIC11□□□□□ -0.65
TRBV12-3P01733 AL008707.1-201ENST00000422498 534 ntBASIC11□□□□□ -0.65
TRBV12-3P01733 DUX4L50-201ENST00000455245 715 ntBASIC11□□□□□ -0.65
TRBV12-3P01733 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 AC024681.1-201ENST00000521917 487 ntBASIC11□□□□□ -0.65
TRBV12-3P01733 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
TRBV12-3P01733 NAT9-211ENST00000580632 799 ntTSL 3 BASIC11□□□□□ -0.65
TRBV12-3P01733 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11□□□□□ -0.65
TRBV12-3P01733 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC11□□□□□ -0.65
TRBV12-3P01733 AL109837.1-201ENST00000603272 613 ntBASIC11□□□□□ -0.65
TRBV12-3P01733 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
TRBV12-3P01733 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11□□□□□ -0.65
TRBV12-3P01733 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
TRBV12-3P01733 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11□□□□□ -0.65
TRBV12-3P01733 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
TRBV12-3P01733 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
TRBV12-3P01733 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
TRBV12-3P01733 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
TRBV12-3P01733 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.99□□□□□ -0.65
TRBV12-3P01733 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms