Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.37□□□□□ -0.11
GPC4O75487 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GPC4O75487 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GPC4O75487 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 FAM58BP-201ENST00000439056 645 ntBASIC14.36□□□□□ -0.11
GPC4O75487 AL645933.1-201ENST00000440087 609 ntBASIC14.36□□□□□ -0.11
GPC4O75487 MTX1P1-201ENST00000440904 838 ntBASIC14.36□□□□□ -0.11
GPC4O75487 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.36□□□□□ -0.11
GPC4O75487 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
GPC4O75487 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC4O75487 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC4O75487 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.36□□□□□ -0.11
GPC4O75487 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.36□□□□□ -0.11
GPC4O75487 MIR6720-201ENST00000611664 98 ntBASIC14.36□□□□□ -0.11
GPC4O75487 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
GPC4O75487 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC4O75487 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC4O75487 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GPC4O75487 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.36□□□□□ -0.11
GPC4O75487 AC011498.7-201ENST00000624986 2027 ntBASIC14.36□□□□□ -0.11
GPC4O75487 TMBIM7P-202ENST00000641474 1516 ntBASIC14.36□□□□□ -0.11
GPC4O75487 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GPC4O75487 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.35□□□□□ -0.11
GPC4O75487 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 MIR663B-201ENST00000408361 115 ntBASIC14.35□□□□□ -0.11
GPC4O75487 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.35□□□□□ -0.11
GPC4O75487 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.35□□□□□ -0.11
GPC4O75487 KLF2P1-201ENST00000447438 1042 ntBASIC14.35□□□□□ -0.11
GPC4O75487 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.35□□□□□ -0.11
GPC4O75487 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.35□□□□□ -0.11
GPC4O75487 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 MIR497HG-202ENST00000572453 3838 ntBASIC14.35□□□□□ -0.11
GPC4O75487 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.35□□□□□ -0.11
GPC4O75487 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 AL008721.1-201ENST00000609964 604 ntBASIC14.35□□□□□ -0.11
GPC4O75487 Z98259.2-201ENST00000641583 609 ntBASIC14.35□□□□□ -0.11
GPC4O75487 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 TCAF1P1-201ENST00000414990 2232 ntBASIC14.35□□□□□ -0.11
GPC4O75487 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GPC4O75487 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC4O75487 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC4O75487 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms