Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AC010086.2-201ENST00000428616 226 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 CCND3P1-201ENST00000438347 580 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 RPSAP70-201ENST00000504462 864 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 URB1-AS1-201ENST00000534991 831 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AC020904.3-201ENST00000624199 442 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AC245369.7-201ENST00000631386 350 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 AL513477.1-201ENST00000602865 2407 ntBASIC18.96■□□□□ 0.63
PHF8Q9UPP1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHF8Q9UPP1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 AC008620.2-201ENST00000510294 1569 ntBASIC18.95■□□□□ 0.62
PHF8Q9UPP1 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 HNRNPA1P10-201ENST00000444945 962 ntBASIC18.95■□□□□ 0.62
PHF8Q9UPP1 TREX1-203ENST00000456089 629 ntTSL 3 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 ALG1L15P-201ENST00000482834 794 ntBASIC18.95■□□□□ 0.62
PHF8Q9UPP1 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 AC004923.3-201ENST00000527532 355 ntBASIC18.95■□□□□ 0.62
PHF8Q9UPP1 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 AC005746.3-201ENST00000614751 393 ntBASIC18.95■□□□□ 0.62
PHF8Q9UPP1 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHF8Q9UPP1 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 EML1-203ENST00000334192 4064 ntTSL 5 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 MIR632-201ENST00000385193 94 ntBASIC18.94■□□□□ 0.62
PHF8Q9UPP1 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 MPV17-209ENST00000405983 859 ntTSL 5 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 DUT-207ENST00000559416 635 ntTSL 2 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 CR392039.1-201ENST00000623217 204 ntBASIC18.94■□□□□ 0.62
PHF8Q9UPP1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 TUBB8P4-201ENST00000511806 1324 ntBASIC18.94■□□□□ 0.62
PHF8Q9UPP1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC18.94■□□□□ 0.62
PHF8Q9UPP1 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PHF8Q9UPP1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms