Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 RCL1-203ENST00000381732 804 ntTSL 2 BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 PGAM1P2-201ENST00000436071 725 ntBASIC21.33■■□□□ 1
RIMBP3Q9UFD9 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 AF274858.2-201ENST00000446370 617 ntTSL 2 BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 AC091893.1-201ENST00000503772 399 ntBASIC21.33■■□□□ 1
RIMBP3Q9UFD9 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 AC069234.1-201ENST00000542620 583 ntTSL 3 BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 AC105105.4-201ENST00000610389 713 ntBASIC21.33■■□□□ 1
RIMBP3Q9UFD9 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RIMBP3Q9UFD9 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 HLA-DRB6-202ENST00000437183 1090 ntBASIC21.32■■□□□ 1
RIMBP3Q9UFD9 RN7SL521P-201ENST00000488398 297 ntBASIC21.32■■□□□ 1
RIMBP3Q9UFD9 AC106774.3-201ENST00000505444 169 ntBASIC21.32■■□□□ 1
RIMBP3Q9UFD9 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 FAM92B-203ENST00000629253 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RIMBP3Q9UFD9 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 AL137784.3-201ENST00000623858 2288 ntBASIC21.31■■□□□ 1
RIMBP3Q9UFD9 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 AL355309.1-201ENST00000442158 78 ntBASIC21.31■■□□□ 1
RIMBP3Q9UFD9 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 ODF3-203ENST00000525282 764 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 ARL14EPL-203ENST00000634632 642 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 AL662907.1-201ENST00000622988 1360 ntBASIC21.31■■□□□ 1
RIMBP3Q9UFD9 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.31■■□□□ 1
RIMBP3Q9UFD9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 RBM14-203ENST00000409372 876 ntTSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 PYY3-201ENST00000419078 213 ntBASIC21.3■■□□□ 1
RIMBP3Q9UFD9 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 ARL15-205ENST00000507646 578 ntTSL 5 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 AC090093.1-201ENST00000611315 271 ntBASIC21.3■■□□□ 1
RIMBP3Q9UFD9 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC21.3■■□□□ 1
RIMBP3Q9UFD9 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 MIR6880-201ENST00000622851 62 ntBASIC21.3■■□□□ 1
RIMBP3Q9UFD9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 AL354702.1-201ENST00000442006 1960 ntBASIC21.3■■□□□ 1
RIMBP3Q9UFD9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RIMBP3Q9UFD9 PCDH8P1-201ENST00000428983 2773 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms