Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AC027601.5-201ENST00000624065 2482 ntBASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AC015909.3-201ENST00000572855 1794 ntBASIC14.25□□□□□ -0.13
SPASTQ9UBP0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AC069218.1-201ENST00000435269 762 ntBASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 PHBP15-201ENST00000574228 665 ntBASIC14.25□□□□□ -0.13
SPASTQ9UBP0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AC015688.4-201ENST00000580780 1647 ntBASIC14.25□□□□□ -0.13
SPASTQ9UBP0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AL354702.1-201ENST00000442006 1960 ntBASIC14.25□□□□□ -0.13
SPASTQ9UBP0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 HSPA7-201ENST00000445535 1927 ntBASIC14.25□□□□□ -0.13
SPASTQ9UBP0 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPASTQ9UBP0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 RNA5SP359-201ENST00000364838 113 ntBASIC14.24□□□□□ -0.13
SPASTQ9UBP0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 OR2R1P-201ENST00000441404 914 ntBASIC14.24□□□□□ -0.13
SPASTQ9UBP0 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 AC022447.6-201ENST00000515522 438 ntBASIC14.24□□□□□ -0.13
SPASTQ9UBP0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 AC124068.2-201ENST00000569473 1109 ntBASIC14.24□□□□□ -0.13
SPASTQ9UBP0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 MEG3_2.1-201ENST00000611456 105 ntBASIC14.24□□□□□ -0.13
SPASTQ9UBP0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms