Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 AC098935.1-201ENST00000446057 611 ntBASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 RPL17P45-201ENST00000586289 509 ntBASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 AP001184.1-201ENST00000637936 376 ntBASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 RN7SL81P-201ENST00000493781 261 ntBASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 RN7SL455P-201ENST00000580629 282 ntBASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 RN7SL555P-201ENST00000584742 339 ntBASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20BQ9P0W2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 RPL13AP3-202ENST00000494676 1473 ntBASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 AC006987.1-201ENST00000413610 527 ntBASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 MPRIPP1-201ENST00000452433 1089 ntBASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 RN7SL665P-201ENST00000578793 300 ntBASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 MIR5572-201ENST00000583188 137 ntBASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMG20BQ9P0W2 AC025262.2-201ENST00000623975 1056 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms