Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PHACTR1Q9C0D0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC007389.4-201ENST00000454674 793 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 USP32P1-208ENST00000506594 1164 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC078819.1-201ENST00000547454 765 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC012085.1-201ENST00000548270 765 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 KRT90P-201ENST00000549264 1064 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC138951.2-201ENST00000623455 1161 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 AC020917.4-201ENST00000623994 1999 ntBASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PHACTR1Q9C0D0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 AP006294.1-201ENST00000415407 339 ntBASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 FAM58BP-201ENST00000439056 645 ntBASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 AC140658.4-201ENST00000561990 352 ntBASIC14.49□□□□□ -0.09
PHACTR1Q9C0D0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms