Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 ECM1P1-201ENST00000604092 1279 ntBASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 AC132938.4-201ENST00000623835 848 ntBASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 AC009474.1-201ENST00000455096 1565 ntBASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 DLX4-206ENST00000611342 1662 ntBASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
AMBRA1Q9C0C7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AC024075.2-201ENST00000598112 1473 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 BCRP2-202ENST00000447763 634 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 BCRP6-201ENST00000510112 632 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 BCRP7-201ENST00000511549 544 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AC025279.2-201ENST00000569730 653 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 OR10B1P-201ENST00000601666 907 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AC004623.1-201ENST00000624592 2127 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 VENTXP1-201ENST00000569334 2716 ntBASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
AMBRA1Q9C0C7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms