Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC067750.1-201ENST00000608826 6545 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13□□□□□ -0.33
USB1Q9BQ65 AC106818.1-201ENST00000623223 3242 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
USB1Q9BQ65 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 AC011840.2-201ENST00000563063 1520 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 AL157902.2-201ENST00000623435 1492 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 TSN-202ENST00000409193 1436 ntTSL 5 BASIC13□□□□□ -0.33
USB1Q9BQ65 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC13□□□□□ -0.33
USB1Q9BQ65 RN7SKP230-201ENST00000365642 335 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
USB1Q9BQ65 HNRNPA1P32-201ENST00000396326 963 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13□□□□□ -0.33
USB1Q9BQ65 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
USB1Q9BQ65 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 SERPINA13P-202ENST00000478994 924 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 AC005740.2-201ENST00000511085 419 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13□□□□□ -0.33
USB1Q9BQ65 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13□□□□□ -0.33
USB1Q9BQ65 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13□□□□□ -0.33
USB1Q9BQ65 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13□□□□□ -0.33
USB1Q9BQ65 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 MIR4760-201ENST00000585040 80 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13□□□□□ -0.33
USB1Q9BQ65 AC007423.1-201ENST00000605009 627 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 AC138649.2-201ENST00000615886 705 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 AL359742.1-201ENST00000622497 540 ntBASIC13□□□□□ -0.33
USB1Q9BQ65 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13□□□□□ -0.33
USB1Q9BQ65 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13□□□□□ -0.33
USB1Q9BQ65 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
USB1Q9BQ65 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 SEPT7P2-202ENST00000398921 823 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 HSFY7P-201ENST00000432672 318 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AC010086.1-201ENST00000437359 1052 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 HSFY8P-201ENST00000437934 318 ntBASIC12.99□□□□□ -0.33
USB1Q9BQ65 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.99□□□□□ -0.33
USB1Q9BQ65 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
USB1Q9BQ65 AL359839.1-201ENST00000451975 1160 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms