Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AC040160.2-201ENST00000623816 1675 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 KLK8-203ENST00000347619 555 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 RN7SKP255-201ENST00000363442 313 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 RN7SKP203-201ENST00000363618 332 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 RN7SKP71-201ENST00000364558 318 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 7SK.1-201ENST00000365328 331 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AC104212.2-201ENST00000478813 628 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 RBP1-206ENST00000617459 667 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 MTHFR-210ENST00000641407 2387 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 HNRNPA1P68-201ENST00000425806 979 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 TULP3P1-202ENST00000453253 1291 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC009517.1-201ENST00000454750 570 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 PARVG-208ENST00000466375 820 ntTSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC133555.4-201ENST00000569081 152 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 RN7SL5P-201ENST00000581458 321 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 KRT127P-201ENST00000547183 433 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 FOS-205ENST00000555242 629 ntTSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 RN7SL322P-201ENST00000583519 299 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MDC1-209ENST00000613547 830 ntTSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC007274.3-201ENST00000619838 385 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AL031587.5-201ENST00000624344 1849 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 NUP210P2-201ENST00000510577 282 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC092535.4-201ENST00000609548 397 ntBASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 CA6-205ENST00000480186 1493 ntTSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
ALMS1Q8TCU4 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms