Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 MARK2P9-201ENST00000430958 1727 ntBASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 TSPY25P-201ENST00000429463 745 ntBASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 IGHJ2P-201ENST00000454480 60 ntBASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 RN7SL277P-201ENST00000481521 288 ntBASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 RPL13AP3-202ENST00000494676 1473 ntBASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 AC061965.1-201ENST00000560524 1465 ntBASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 BRD7P5-201ENST00000299197 1822 ntBASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PCDH19Q8TAB3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 BX284668.4-201ENST00000453917 508 ntBASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 HIST2H2BC-201ENST00000498492 580 ntBASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AC084346.2-201ENST00000607097 949 ntBASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PCDH19Q8TAB3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PCDH19Q8TAB3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms