Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDND2Q8NHS1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 AC234782.1-201ENST00000451950 919 ntBASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 POU5F1P2-201ENST00000521750 823 ntBASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TMBIM7P-202ENST00000641474 1516 ntBASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 Z82170.1-201ENST00000625081 3192 ntBASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CLDND2Q8NHS1 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.18□□□□□ -0.46
CLDND2Q8NHS1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms