Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC105137.3-201ENST00000617588 984 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC009084.3-201ENST00000623356 437 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC090502.4-201ENST00000551714 1386 ntBASIC15.85■□□□□ 0.13
TRIM50Q86XT4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM50Q86XT4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 AC099063.4-201ENST00000641099 1602 ntBASIC15.84■□□□□ 0.13
TRIM50Q86XT4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 AL390755.1-201ENST00000623716 2027 ntBASIC15.84■□□□□ 0.13
TRIM50Q86XT4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM50Q86XT4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM50Q86XT4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AL627389.1-201ENST00000413508 1182 ntBASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AC006987.1-201ENST00000413610 527 ntBASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 LYPLA2P1-203ENST00000447689 696 ntBASIC15.83■□□□□ 0.12
TRIM50Q86XT4 PIN4P1-201ENST00000451079 396 ntBASIC15.83■□□□□ 0.12
TRIM50Q86XT4 DPY19L2P5-201ENST00000456300 331 ntBASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AP003398.1-201ENST00000531124 318 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms