Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AKR7A2P1-201ENST00000460134 915 ntBASIC9.57□□□□□ -0.88
SCXQ7RTU7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AC106820.3-201ENST00000561653 397 ntBASIC9.57□□□□□ -0.88
SCXQ7RTU7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 AC138028.6-201ENST00000616106 1482 ntBASIC9.57□□□□□ -0.88
SCXQ7RTU7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC9.57□□□□□ -0.88
SCXQ7RTU7 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SCXQ7RTU7 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 AC023024.2-201ENST00000623561 1993 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 ZBTB45P1-201ENST00000452761 1456 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 HNRNPA1P63-201ENST00000427917 963 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SCXQ7RTU7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 HLA-K-203ENST00000430151 1046 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 FNTAP2-201ENST00000430308 634 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 HIST2H2BB-201ENST00000449108 381 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 FTLP10-202ENST00000505798 471 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 AC126915.1-201ENST00000522847 1038 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 AP003171.2-201ENST00000528208 925 ntBASIC9.56□□□□□ -0.88
SCXQ7RTU7 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC9.56□□□□□ -0.88
SCXQ7RTU7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms