Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
REEP3Q6NUK4 ABCD1P2-201ENST00000429313 1601 ntBASIC13.31□□□□□ -0.28
REEP3Q6NUK4 AL359845.1-201ENST00000458202 1648 ntBASIC13.31□□□□□ -0.28
REEP3Q6NUK4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 RCC2P1-201ENST00000452257 1476 ntBASIC13.31□□□□□ -0.28
REEP3Q6NUK4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 AP005018.1-201ENST00000525475 301 ntBASIC13.31□□□□□ -0.28
REEP3Q6NUK4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
REEP3Q6NUK4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 AC003686.1-201ENST00000550956 1034 ntBASIC13.3□□□□□ -0.28
REEP3Q6NUK4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 AC100827.2-201ENST00000563214 1194 ntBASIC13.3□□□□□ -0.28
REEP3Q6NUK4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms