Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 AL590556.2-202ENST00000636906 844 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 DDC-212ENST00000615193 1674 ntTSL 3 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 MKRN7P-201ENST00000433469 1371 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 SFPQP1-201ENST00000446621 1786 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 RN7SKP212-201ENST00000410851 328 ntBASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 AF186996.6-201ENST00000485294 149 ntBASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 AC092865.2-201ENST00000439409 971 ntBASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 PCTP-206ENST00000573500 919 ntTSL 3 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 AC211476.2-201ENST00000608799 708 ntBASIC9.15□□□□□ -0.95
VPS13DQ5THJ4 SIGLEC20P-201ENST00000595243 1311 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 WDR54-202ENST00000409791 854 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 IQCF4-203ENST00000428561 420 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 SAP18P2-201ENST00000434334 459 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RPL3P9-201ENST00000463217 1183 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 METTL7AP1-201ENST00000547343 496 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RBMXP1-201ENST00000408004 1191 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RNA5SP288-201ENST00000516075 93 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AL513497.1-201ENST00000624273 2083 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 LINC02486-201ENST00000604157 3000 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms