Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 MIR632-201ENST00000385193 94 ntBASIC17.49■□□□□ 0.39
RC3H1Q5TC82 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 CDK4P1-201ENST00000454213 828 ntBASIC17.49■□□□□ 0.39
RC3H1Q5TC82 TREX1-203ENST00000456089 629 ntTSL 3 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 AC008494.1-201ENST00000497612 796 ntBASIC17.49■□□□□ 0.39
RC3H1Q5TC82 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 CTBP2P6-201ENST00000526402 1229 ntBASIC17.49■□□□□ 0.39
RC3H1Q5TC82 MBP-230ENST00000528160 584 ntTSL 5 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RC3H1Q5TC82 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 GYG1-209ENST00000483267 801 ntTSL 2 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AC010202.1-201ENST00000551181 405 ntBASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AC132812.1-201ENST00000583145 892 ntBASIC17.48■□□□□ 0.39
RC3H1Q5TC82 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AC020922.4-201ENST00000621389 339 ntBASIC17.48■□□□□ 0.39
RC3H1Q5TC82 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 KRT8P25-201ENST00000473150 1456 ntBASIC17.48■□□□□ 0.39
RC3H1Q5TC82 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RC3H1Q5TC82 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AC126177.1-201ENST00000547829 2218 ntBASIC17.47■□□□□ 0.39
RC3H1Q5TC82 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 PSME2P2-201ENST00000453033 700 ntBASIC17.47■□□□□ 0.39
RC3H1Q5TC82 NDUFB2P1-201ENST00000506966 295 ntBASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AC123912.6-201ENST00000612657 315 ntBASIC17.47■□□□□ 0.39
RC3H1Q5TC82 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 KRT8P42-201ENST00000405771 1399 ntBASIC17.47■□□□□ 0.39
RC3H1Q5TC82 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AC092384.3-202ENST00000564646 2873 ntBASIC17.47■□□□□ 0.39
RC3H1Q5TC82 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.47■□□□□ 0.39
RC3H1Q5TC82 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms