Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AP000911.2-201ENST00000534330 502 ntBASIC15.13■□□□□ 0.01
VARS2Q5ST30 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AL022313.4-201ENST00000562756 2046 ntBASIC15.13■□□□□ 0.01
VARS2Q5ST30 AC141586.1-203ENST00000567242 366 ntBASIC15.13■□□□□ 0.01
VARS2Q5ST30 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 MIR2392-201ENST00000584881 84 ntBASIC15.13■□□□□ 0.01
VARS2Q5ST30 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 AC007952.5-201ENST00000572818 1486 ntBASIC15.13■□□□□ 0.01
VARS2Q5ST30 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARS2Q5ST30 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VARS2Q5ST30 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 BX679664.3-201ENST00000414070 555 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC098934.1-203ENST00000442868 1262 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 AL354861.1-201ENST00000445213 355 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC018638.5-201ENST00000450885 754 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC113935.1-201ENST00000471722 555 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 AL157792.1-201ENST00000488281 530 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 PRELID3BP7-201ENST00000503606 469 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC095040.1-201ENST00000513286 675 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 RN7SL470P-201ENST00000583069 259 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC005520.3-201ENST00000602874 370 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC005041.3-201ENST00000606287 649 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 MIR6858-201ENST00000620733 67 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 AC097359.2-201ENST00000604992 2389 ntBASIC15.12■□□□□ 0.01
VARS2Q5ST30 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms