Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL049840.2-201ENST00000602722 535 ntBASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 FO393412.1-201ENST00000619841 382 ntBASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 AL139158.3-201ENST00000641212 1562 ntBASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHROOM1Q2M3G4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 AC100858.1-201ENST00000514059 1228 ntBASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 AC008972.2-201ENST00000606587 494 ntBASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM1Q2M3G4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 AL157996.1-201ENST00000624684 2299 ntBASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 RN7SL582P-201ENST00000491078 279 ntBASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 GOLGA2P7-209ENST00000560408 745 ntBASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 HSPA7-201ENST00000445535 1927 ntBASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM1Q2M3G4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms