Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 AC091271.1-201ENST00000611877 1162 ntBASIC13.47□□□□□ -0.25
RAE1P78406 AC004623.1-201ENST00000624592 2127 ntBASIC13.47□□□□□ -0.25
RAE1P78406 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.47□□□□□ -0.25
RAE1P78406 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.47□□□□□ -0.25
RAE1P78406 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAE1P78406 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.47□□□□□ -0.25
RAE1P78406 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RAE1P78406 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RAE1P78406 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RAE1P78406 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RAE1P78406 SNORA50C-201ENST00000408535 133 ntBASIC13.46□□□□□ -0.25
RAE1P78406 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.46□□□□□ -0.25
RAE1P78406 NKAIN1P1-201ENST00000435754 582 ntBASIC13.46□□□□□ -0.25
RAE1P78406 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 AC005740.2-201ENST00000511085 419 ntBASIC13.46□□□□□ -0.25
RAE1P78406 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.46□□□□□ -0.25
RAE1P78406 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.46□□□□□ -0.25
RAE1P78406 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.46□□□□□ -0.25
RAE1P78406 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 SNORA50.1-201ENST00000628590 135 ntBASIC13.46□□□□□ -0.25
RAE1P78406 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RAE1P78406 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAE1P78406 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.46□□□□□ -0.25
RAE1P78406 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.46□□□□□ -0.25
RAE1P78406 AC114271.1-201ENST00000612689 2813 ntBASIC13.46□□□□□ -0.25
RAE1P78406 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.26
RAE1P78406 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.46□□□□□ -0.26
RAE1P78406 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
RAE1P78406 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.46□□□□□ -0.26
RAE1P78406 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.46□□□□□ -0.26
RAE1P78406 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
RAE1P78406 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAE1P78406 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.46□□□□□ -0.26
RAE1P78406 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.45□□□□□ -0.26
RAE1P78406 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAE1P78406 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RAE1P78406 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.45□□□□□ -0.26
RAE1P78406 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAE1P78406 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms