Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 AC019294.4-201ENST00000561777 2905 ntBASIC12.75□□□□□ -0.37
ACTA1P68133 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ACTA1P68133 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 AL136309.1-201ENST00000403917 691 ntBASIC12.75□□□□□ -0.37
ACTA1P68133 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.75□□□□□ -0.37
ACTA1P68133 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.75□□□□□ -0.37
ACTA1P68133 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 AL512310.5-201ENST00000551999 515 ntBASIC12.75□□□□□ -0.37
ACTA1P68133 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 ECM1P1-201ENST00000604092 1279 ntBASIC12.75□□□□□ -0.37
ACTA1P68133 AC008494.3-201ENST00000606615 944 ntBASIC12.75□□□□□ -0.37
ACTA1P68133 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.75□□□□□ -0.37
ACTA1P68133 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.75□□□□□ -0.37
ACTA1P68133 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
ACTA1P68133 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ACTA1P68133 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 LINC01165-201ENST00000445190 1623 ntBASIC12.74□□□□□ -0.37
ACTA1P68133 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ACTA1P68133 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ACTA1P68133 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ACTA1P68133 HMGA1P1-201ENST00000415560 1062 ntBASIC12.74□□□□□ -0.37
ACTA1P68133 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.74□□□□□ -0.37
ACTA1P68133 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.74□□□□□ -0.37
ACTA1P68133 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.74□□□□□ -0.37
ACTA1P68133 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.74□□□□□ -0.37
ACTA1P68133 RNA5SP486-201ENST00000515961 83 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms