Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RN7SL510P-201ENST00000581311 263 ntBASIC12.28□□□□□ -0.44
AP3S2P59780 BX088702.1-201ENST00000610784 235 ntBASIC12.28□□□□□ -0.44
AP3S2P59780 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
AP3S2P59780 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 AC108024.1-201ENST00000626286 1721 ntBASIC12.28□□□□□ -0.44
AP3S2P59780 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP3S2P59780 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
AP3S2P59780 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
AP3S2P59780 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
AP3S2P59780 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S2P59780 AC061965.1-201ENST00000560524 1465 ntBASIC12.27□□□□□ -0.44
AP3S2P59780 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
AP3S2P59780 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.27□□□□□ -0.44
AP3S2P59780 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S2P59780 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S2P59780 LRRC59-203ENST00000576448 1531 ntBASIC12.27□□□□□ -0.44
AP3S2P59780 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.27□□□□□ -0.44
AP3S2P59780 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
AP3S2P59780 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 NBN-203ENST00000409330 4523 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
AP3S2P59780 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
AP3S2P59780 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S2P59780 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.27□□□□□ -0.45
AP3S2P59780 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S2P59780 MEIS3P1-201ENST00000495167 958 ntBASIC12.27□□□□□ -0.45
AP3S2P59780 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.27□□□□□ -0.45
AP3S2P59780 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 AC036164.1-201ENST00000570544 333 ntBASIC12.27□□□□□ -0.45
AP3S2P59780 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.27□□□□□ -0.45
AP3S2P59780 AL049840.4-201ENST00000602422 811 ntBASIC12.27□□□□□ -0.45
AP3S2P59780 AC140113.2-201ENST00000604370 208 ntBASIC12.27□□□□□ -0.45
AP3S2P59780 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.27□□□□□ -0.45
AP3S2P59780 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
AP3S2P59780 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 AP001972.5-201ENST00000624624 2338 ntBASIC12.27□□□□□ -0.45
AP3S2P59780 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
AP3S2P59780 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.27□□□□□ -0.45
AP3S2P59780 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.27□□□□□ -0.45
AP3S2P59780 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
AP3S2P59780 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 AC110048.1-201ENST00000604293 2157 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms